RPS7B/YNL096C Gene Ontology Annotations Help

This page displays GO annotations in different sections according to the annotation method used to add that annotation to SGD.

RPS7B Manually curated*:

Last Reviewed on: 2008-12-03    Molecular Function | Biological Process | Cellular Component

Manually curated Molecular Function
Annotation(s) Evidence Reference(s) Assigned By
structural constituent of ribosome NAS: Non-traceable Author Statement
Assigned on 2008-12-03
Planta RJ and Mager WH  (1998) The list of cytoplasmic ribosomal proteins of Saccharomyces cerevisiae. Yeast 14(5):471-7 SGD

Manually curated Biological Process
Annotation(s) Evidence Reference(s) Assigned By
cytoplasmic translation NAS: Non-traceable Author Statement
Assigned on 2008-12-03
Planta RJ and Mager WH  (1998) The list of cytoplasmic ribosomal proteins of Saccharomyces cerevisiae. Yeast 14(5):471-7 SGD
ribosome biogenesis IGI: Inferred from Genetic Interaction
with SGD:RPS7A
Assigned on 2008-12-03
Ferreira-Cerca S, et al.  (2005) Roles of eukaryotic ribosomal proteins in maturation and transport of pre-18S rRNA and ribosome function. Mol Cell 20(2):263-75 SGD

Manually curated Cellular Component
Annotation(s) Evidence Reference(s) Assigned By
cytosolic small ribosomal subunit NAS: Non-traceable Author Statement
Assigned on 2008-12-03
Planta RJ and Mager WH  (1998) The list of cytoplasmic ribosomal proteins of Saccharomyces cerevisiae. Yeast 14(5):471-7 SGD
small-subunit processome IDA: Inferred from Direct Assay
Assigned on 2008-03-20
Bernstein KA, et al.  (2004) The small-subunit processome is a ribosome assembly intermediate. Eukaryot Cell 3(6):1619-26 SGD

* Manually curated GO annotations reflect our best understanding of the basic molecular function, biological process, and cellular component for this gene product. Manually curated annotations are assigned by SGD curators based on published papers when available, or by curatorial statements if necessary. Curators periodically review all Manually curated GO annotations for accuracy and completeness. The "Last Reviewed on:" date at the top of this section indicates when these annotations were last reviewed.


RPS7B High-throughput**:


There are no High-throughput annotations for RPS7B

** GO annotations from High-throughput experiments are made based on a variety of large scale high-throughput experiments, including genome-wide experiments. Many of these annotations are made based on GO annotations (or mappings to GO annotations) assigned by the authors, rather than SGD curators. While SGD curators read these publications and often work closely with authors to incorporate the information, each individual annotation may not necessarily be reviewed by a curator. GO Annotations from high-throughput experiments will be assigned only when this type of data is available, and thus may not be assigned in all three aspects of the Gene Ontologies.


RPS7B Computational***:

Molecular Function | Biological Process | Cellular Component

Computational Molecular Function
Annotation(s) Evidence Reference(s) Assigned By
structural constituent of ribosome IEA: Inferred from Electronic Annotation
with EBI:IPR000554
Last updated 2013-03-02
DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms. InterPro

Computational Biological Process
Annotation(s) Evidence Reference(s) Assigned By
ribosomal small subunit biogenesis IBA: Inferred from Biological Aspect of Ancestor
with PANTHER:PTHR11278_AN0
Last updated 2011-10-06
Gaudet P, et al.  (2011) Annotation inferences using phylogenetic trees. RefGenome
ribosome biogenesis IEA: Inferred from Electronic Annotation
with EBI:KW-0690
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
rRNA processing IBA: Inferred from Biological Aspect of Ancestor
with PANTHER:PTHR11278_AN0
Last updated 2011-10-06
Gaudet P, et al.  (2011) Annotation inferences using phylogenetic trees. RefGenome
IEA: Inferred from Electronic Annotation
with EBI:KW-0698
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
translation IEA: Inferred from Electronic Annotation
with EBI:IPR000554
Last updated 2013-03-02
DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms. InterPro

Computational Cellular Component
Annotation(s) Evidence Reference(s) Assigned By
90S preribosome IBA: Inferred from Biological Aspect of Ancestor
with PANTHER:PTHR11278_AN0
Last updated 2011-10-06
Gaudet P, et al.  (2011) Annotation inferences using phylogenetic trees. RefGenome
cytoplasm IEA: Inferred from Electronic Annotation
with EBI:SL-0086
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on the manual assignment of UniProtKB Subcellular Location terms in UniProtKB/Swiss-Prot entries. UniProtKB
IEA: Inferred from Electronic Annotation
with EBI:KW-0963
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
cytosolic small ribosomal subunit IBA: Inferred from Biological Aspect of Ancestor
with PANTHER:PTHR11278_AN0
Last updated 2011-10-06
Gaudet P, et al.  (2011) Annotation inferences using phylogenetic trees. RefGenome
intracellular IEA: Inferred from Electronic Annotation
with EBI:IPR000554
Last updated 2013-03-02
DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms. InterPro
nucleolus IEA: Inferred from Electronic Annotation
with EBI:SL-0188
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on the manual assignment of UniProtKB Subcellular Location terms in UniProtKB/Swiss-Prot entries. UniProtKB
nucleus IEA: Inferred from Electronic Annotation
with EBI:KW-0539
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
ribonucleoprotein complex IEA: Inferred from Electronic Annotation
with EBI:KW-0687
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
ribosome IEA: Inferred from Electronic Annotation
with EBI:IPR000554
Last updated 2013-03-02
DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms. InterPro
IEA: Inferred from Electronic Annotation
with EBI:KW-0689
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB

*** Computational GO Annotations are predictions. These annotations are NOT reviewed by a curator. Currently, all computational GO annotations for S. cerevisiae are assigned by an external source (for example, the Gene Ontology Annotation (GOA) project of the European Bioinformatics Institute (EBI)).