CTR3/YLR411W Gene Ontology Annotations Help

This page displays GO annotations in different sections according to the annotation method used to add that annotation to SGD.

CTR3 Manually curated*:

Last Reviewed on: 2002-09-19    Molecular Function | Biological Process | Cellular Component

Manually curated Molecular Function
Annotation(s) Evidence Reference(s) Assigned By
copper uptake transmembrane transporter activity IDA: Inferred from Direct Assay
Assigned on 2002-09-19
Pena MM, et al.  (2000) Characterization of the Saccharomyces cerevisiae high affinity copper transporter Ctr3. J Biol Chem 275(43):33244-51 SGD

Manually curated Biological Process
Annotation(s) Evidence Reference(s) Assigned By
copper ion import IDA: Inferred from Direct Assay
Assigned on 2002-09-19
Pena MM, et al.  (2000) Characterization of the Saccharomyces cerevisiae high affinity copper transporter Ctr3. J Biol Chem 275(43):33244-51 SGD

Manually curated Cellular Component
Annotation(s) Evidence Reference(s) Assigned By
integral to plasma membrane IDA: Inferred from Direct Assay
Assigned on 2002-09-19
Pena MM, et al.  (2000) Characterization of the Saccharomyces cerevisiae high affinity copper transporter Ctr3. J Biol Chem 275(43):33244-51 SGD

* Manually curated GO annotations reflect our best understanding of the basic molecular function, biological process, and cellular component for this gene product. Manually curated annotations are assigned by SGD curators based on published papers when available, or by curatorial statements if necessary. Curators periodically review all Manually curated GO annotations for accuracy and completeness. The "Last Reviewed on:" date at the top of this section indicates when these annotations were last reviewed.


CTR3 High-throughput**:


There are no High-throughput annotations for CTR3

** GO annotations from High-throughput experiments are made based on a variety of large scale high-throughput experiments, including genome-wide experiments. Many of these annotations are made based on GO annotations (or mappings to GO annotations) assigned by the authors, rather than SGD curators. While SGD curators read these publications and often work closely with authors to incorporate the information, each individual annotation may not necessarily be reviewed by a curator. GO Annotations from high-throughput experiments will be assigned only when this type of data is available, and thus may not be assigned in all three aspects of the Gene Ontologies.


CTR3 Computational***:

Molecular Function | Biological Process | Cellular Component

Computational Molecular Function
Annotation(s) Evidence Reference(s) Assigned By
copper ion transmembrane transporter activity IEA: Inferred from Electronic Annotation
with EBI:IPR007274
Last updated 2013-03-02
DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms. InterPro

Computational Biological Process
Annotation(s) Evidence Reference(s) Assigned By
copper ion transmembrane transport IEA: Inferred from Electronic Annotation
with EBI:IPR007274
Last updated 2013-03-02
DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms. InterPro
copper ion transport IEA: Inferred from Electronic Annotation
with EBI:KW-0187
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
ion transport IEA: Inferred from Electronic Annotation
with EBI:KW-0406
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
transport IEA: Inferred from Electronic Annotation
with EBI:KW-0813
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB

Computational Cellular Component
Annotation(s) Evidence Reference(s) Assigned By
cytoplasmic vesicle IEA: Inferred from Electronic Annotation
with EBI:KW-0968
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
cytoplasmic vesicle membrane IEA: Inferred from Electronic Annotation
with EBI:SL-0089
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on the manual assignment of UniProtKB Subcellular Location terms in UniProtKB/Swiss-Prot entries. UniProtKB
integral to membrane IEA: Inferred from Electronic Annotation
with EBI:IPR007274
Last updated 2013-03-02
DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms. InterPro
IEA: Inferred from Electronic Annotation
with EBI:KW-0812
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
membrane IEA: Inferred from Electronic Annotation
with EBI:KW-0472
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB

*** Computational GO Annotations are predictions. These annotations are NOT reviewed by a curator. Currently, all computational GO annotations for S. cerevisiae are assigned by an external source (for example, the Gene Ontology Annotation (GOA) project of the European Bioinformatics Institute (EBI)).