GCN1/YGL195W Gene Ontology Annotations Help

This page displays GO annotations in different sections according to the annotation method used to add that annotation to SGD.

GCN1 Manually curated*:

Last Reviewed on: 2002-08-02    Molecular Function | Biological Process | Cellular Component

Manually curated Molecular Function
Annotation(s) Evidence Reference(s) Assigned By
molecular_function
unknown
ND: No Biological Data Available
Assigned on 2002-08-02
SGD  (2002) Use of the ND evidence code for Gene Ontology (GO) terms in SGD () SGD

Manually curated Biological Process
Annotation(s) Evidence Reference(s) Assigned By
regulation of translational elongation IMP: Inferred from Mutant Phenotype
Assigned on 2002-08-02
IPI: Inferred from Physical Interaction
Assigned on 2002-08-02
Marton MJ, et al.  (1997) Evidence that GCN1 and GCN20, translational regulators of GCN4, function on elongating ribosomes in activation of eIF2alpha kinase GCN2. Mol Cell Biol 17(8):4474-89 SGD

Manually curated Cellular Component
Annotation(s) Evidence Reference(s) Assigned By
cytosol IDA: Inferred from Direct Assay
Assigned on 2002-08-02
Marton MJ, et al.  (1997) Evidence that GCN1 and GCN20, translational regulators of GCN4, function on elongating ribosomes in activation of eIF2alpha kinase GCN2. Mol Cell Biol 17(8):4474-89 SGD
cytosolic ribosome IDA: Inferred from Direct Assay
Assigned on 2002-08-02
Marton MJ, et al.  (1997) Evidence that GCN1 and GCN20, translational regulators of GCN4, function on elongating ribosomes in activation of eIF2alpha kinase GCN2. Mol Cell Biol 17(8):4474-89 SGD

* Manually curated GO annotations reflect our best understanding of the basic molecular function, biological process, and cellular component for this gene product. Manually curated annotations are assigned by SGD curators based on published papers when available, or by curatorial statements if necessary. Curators periodically review all Manually curated GO annotations for accuracy and completeness. The "Last Reviewed on:" date at the top of this section indicates when these annotations were last reviewed.


GCN1 High-throughput**:

Cellular Component

High-throughput Cellular Component
Annotation(s) Evidence Reference(s) Assigned By
mitochondrion IDA: Inferred from Direct Assay
Assigned on 2006-12-12
Reinders J, et al.  (2006) Toward the complete yeast mitochondrial proteome: multidimensional separation techniques for mitochondrial proteomics. J Proteome Res 5(7):1543-54 SGD
IDA: Inferred from Direct Assay
Assigned on 2004-09-28
Sickmann A, et al.  (2003) The proteome of Saccharomyces cerevisiae mitochondria. Proc Natl Acad Sci U S A 100(23):13207-12 SGD

** GO annotations from High-throughput experiments are made based on a variety of large scale high-throughput experiments, including genome-wide experiments. Many of these annotations are made based on GO annotations (or mappings to GO annotations) assigned by the authors, rather than SGD curators. While SGD curators read these publications and often work closely with authors to incorporate the information, each individual annotation may not necessarily be reviewed by a curator. GO Annotations from high-throughput experiments will be assigned only when this type of data is available, and thus may not be assigned in all three aspects of the Gene Ontologies.


GCN1 Computational***:

Biological Process

Computational Biological Process
Annotation(s) Evidence Reference(s) Assigned By
regulation of translation IEA: Inferred from Electronic Annotation
with EBI:KW-0810
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB

*** Computational GO Annotations are predictions. These annotations are NOT reviewed by a curator. Currently, all computational GO annotations for S. cerevisiae are assigned by an external source (for example, the Gene Ontology Annotation (GOA) project of the European Bioinformatics Institute (EBI)).