DYN2/YDR424C Gene Ontology Annotations Help

This page displays GO annotations in different sections according to the annotation method used to add that annotation to SGD.

DYN2 Manually curated*:

Last Reviewed on: 2001-06-20    Molecular Function | Biological Process | Cellular Component

Manually curated Molecular Function
Annotation(s) Evidence Reference(s) Assigned By
molecular_function
unknown
ND: No Biological Data Available
Assigned on 2008-08-18
SGD  (2002) Use of the ND evidence code for Gene Ontology (GO) terms in SGD () SGD

Manually curated Biological Process
Annotation(s) Evidence Reference(s) Assigned By
actin filament-based process IGI: Inferred from Genetic Interaction
Assigned on 2001-06-20
Karpova TS, et al.  (1993) Mutations that enhance the cap2 null mutant phenotype in Saccharomyces cerevisiae affect the actin cytoskeleton, morphogenesis and pattern of growth. Genetics 135(3):693-709 SGD
microtubule-based process IGI: Inferred from Genetic Interaction
Assigned on 2001-01-18
Dick T, et al.  (1996) Molecular and genetic characterization of SLC1, a putative Saccharomyces cerevisiae homolog of the metazoan cytoplasmic dynein light chain 1. Mol Gen Genet 251(1):38-43 SGD
nuclear pore complex assembly IGI: Inferred from Genetic Interaction
with SGD:NUP159, SGD:NSP1, SGD:NUP82
Assigned on 2007-06-25
IMP: Inferred from Mutant Phenotype
Assigned on 2007-06-25
IPI: Inferred from Physical Interaction
with SGD:NUP159
Assigned on 2007-06-25
Stelter P, et al.  (2007) Molecular basis for the functional interaction of dynein light chain with the nuclear-pore complex. Nat Cell Biol 9(7):788-96 SGD

Manually curated Cellular Component
Annotation(s) Evidence Reference(s) Assigned By
cytoplasmic dynein complex ISS: Inferred from Sequence or structural Similarity
Assigned on 2005-02-24
Dick T, et al.  (1996) Molecular and genetic characterization of SLC1, a putative Saccharomyces cerevisiae homolog of the metazoan cytoplasmic dynein light chain 1. Mol Gen Genet 251(1):38-43 SGD
cytoplasmic microtubule TAS: Traceable Author Statement
Assigned on 2004-12-03
Winsor B and Schiebel E  (1997) Review: an overview of the Saccharomyces cerevisiae microtubule and microfilament cytoskeleton. Yeast 13(5):399-434 SGD
colocalizes_with nuclear pore IDA: Inferred from Direct Assay
Assigned on 2007-06-25
Stelter P, et al.  (2007) Molecular basis for the functional interaction of dynein light chain with the nuclear-pore complex. Nat Cell Biol 9(7):788-96 SGD
peroxisome IDA: Inferred from Direct Assay
Assigned on 2007-06-25
Stelter P, et al.  (2007) Molecular basis for the functional interaction of dynein light chain with the nuclear-pore complex. Nat Cell Biol 9(7):788-96 SGD

* Manually curated GO annotations reflect our best understanding of the basic molecular function, biological process, and cellular component for this gene product. Manually curated annotations are assigned by SGD curators based on published papers when available, or by curatorial statements if necessary. Curators periodically review all Manually curated GO annotations for accuracy and completeness. The "Last Reviewed on:" date at the top of this section indicates when these annotations were last reviewed.


DYN2 High-throughput**:


There are no High-throughput annotations for DYN2

** GO annotations from High-throughput experiments are made based on a variety of large scale high-throughput experiments, including genome-wide experiments. Many of these annotations are made based on GO annotations (or mappings to GO annotations) assigned by the authors, rather than SGD curators. While SGD curators read these publications and often work closely with authors to incorporate the information, each individual annotation may not necessarily be reviewed by a curator. GO Annotations from high-throughput experiments will be assigned only when this type of data is available, and thus may not be assigned in all three aspects of the Gene Ontologies.


DYN2 Computational***:

Molecular Function | Biological Process | Cellular Component

Computational Molecular Function
Annotation(s) Evidence Reference(s) Assigned By
motor activity IEA: Inferred from Electronic Annotation
with EBI:KW-0243
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB

Computational Biological Process
Annotation(s) Evidence Reference(s) Assigned By
microtubule-based process IEA: Inferred from Electronic Annotation
with EBI:IPR019763, EBI:IPR001372
Last updated 2013-03-02
DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms. InterPro
transport IEA: Inferred from Electronic Annotation
with EBI:KW-0813
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB

Computational Cellular Component
Annotation(s) Evidence Reference(s) Assigned By
cytoplasm IEA: Inferred from Electronic Annotation
with EBI:KW-0963
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
cytoskeleton IEA: Inferred from Electronic Annotation
with EBI:SL-0090
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on the manual assignment of UniProtKB Subcellular Location terms in UniProtKB/Swiss-Prot entries. UniProtKB
IEA: Inferred from Electronic Annotation
with EBI:KW-0206
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
dynein complex IEA: Inferred from Electronic Annotation
with EBI:KW-0243
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
microtubule IEA: Inferred from Electronic Annotation
with EBI:KW-0493
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
microtubule associated complex IEA: Inferred from Electronic Annotation
with EBI:IPR019763, EBI:IPR001372
Last updated 2013-03-02
DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms. InterPro

*** Computational GO Annotations are predictions. These annotations are NOT reviewed by a curator. Currently, all computational GO annotations for S. cerevisiae are assigned by an external source (for example, the Gene Ontology Annotation (GOA) project of the European Bioinformatics Institute (EBI)).