INM2/YDR287W Gene Ontology Annotations Help

This page displays GO annotations in different sections according to the annotation method used to add that annotation to SGD.

INM2 Manually curated*:

Last Reviewed on: 2010-05-11    Molecular Function | Biological Process | Cellular Component

Manually curated Molecular Function
Annotation(s) Evidence Reference(s) Assigned By
inositol monophosphate 1-phosphatase activity ISA: Inferred from Sequence Alignment
with EBI:P0ADG4
Assigned on 2010-05-11
IDA: Inferred from Direct Assay
Assigned on 2003-03-25
Lopez F, et al.  (1999) The yeast inositol monophosphatase is a lithium- and sodium-sensitive enzyme encoded by a non-essential gene pair. Mol Microbiol 31(4):1255-64 SGD
IGI: Inferred from Genetic Interaction
with SGD:INM1
Assigned on 2010-05-11
IMP: Inferred from Mutant Phenotype
Assigned on 2010-05-11
Navarro-Avino JP, et al.  (2003) Yeast inositol mono- and trisphosphate levels are modulated by inositol monophosphatase activity and nutrients. Biochem Biophys Res Commun 302(1):41-5 SGD

Manually curated Biological Process
Annotation(s) Evidence Reference(s) Assigned By
inositol phosphate dephosphorylation IDA: Inferred from Direct Assay
Assigned on 2005-03-31
Lopez F, et al.  (1999) The yeast inositol monophosphatase is a lithium- and sodium-sensitive enzyme encoded by a non-essential gene pair. Mol Microbiol 31(4):1255-64 SGD
IGI: Inferred from Genetic Interaction
with SGD:INM1
Assigned on 2010-05-11
IMP: Inferred from Mutant Phenotype
Assigned on 2010-05-11
Navarro-Avino JP, et al.  (2003) Yeast inositol mono- and trisphosphate levels are modulated by inositol monophosphatase activity and nutrients. Biochem Biophys Res Commun 302(1):41-5 SGD

Manually curated Cellular Component
Annotation(s) Evidence Reference(s) Assigned By
cellular_component
unknown
ND: No Biological Data Available
Assigned on 2003-03-25
SGD  (2002) Use of the ND evidence code for Gene Ontology (GO) terms in SGD () SGD

* Manually curated GO annotations reflect our best understanding of the basic molecular function, biological process, and cellular component for this gene product. Manually curated annotations are assigned by SGD curators based on published papers when available, or by curatorial statements if necessary. Curators periodically review all Manually curated GO annotations for accuracy and completeness. The "Last Reviewed on:" date at the top of this section indicates when these annotations were last reviewed.


INM2 High-throughput**:


There are no High-throughput annotations for INM2

** GO annotations from High-throughput experiments are made based on a variety of large scale high-throughput experiments, including genome-wide experiments. Many of these annotations are made based on GO annotations (or mappings to GO annotations) assigned by the authors, rather than SGD curators. While SGD curators read these publications and often work closely with authors to incorporate the information, each individual annotation may not necessarily be reviewed by a curator. GO Annotations from high-throughput experiments will be assigned only when this type of data is available, and thus may not be assigned in all three aspects of the Gene Ontologies.


INM2 Computational***:

Molecular Function | Biological Process

Computational Molecular Function
Annotation(s) Evidence Reference(s) Assigned By
hydrolase activity IEA: Inferred from Electronic Annotation
with EBI:KW-0378
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
inositol monophosphate 1-phosphatase activity IEA: Inferred from Electronic Annotation
with IUBMB:3.1.3.25
Last updated 2013-03-02
GOA curators and MGI curators  (2001) Gene Ontology annotation based on Enzyme Commission mapping. UniProtKB
inositol monophosphate 3-phosphatase activity IEA: Inferred from Electronic Annotation
with IUBMB:3.1.3.25
Last updated 2013-03-02
GOA curators and MGI curators  (2001) Gene Ontology annotation based on Enzyme Commission mapping. UniProtKB
inositol monophosphate 4-phosphatase activity IEA: Inferred from Electronic Annotation
with IUBMB:3.1.3.25
Last updated 2013-03-02
GOA curators and MGI curators  (2001) Gene Ontology annotation based on Enzyme Commission mapping. UniProtKB
inositol monophosphate phosphatase activity IEA: Inferred from Electronic Annotation
with IUBMB:3.1.3.25
Last updated 2013-03-02
GOA curators and MGI curators  (2001) Gene Ontology annotation based on Enzyme Commission mapping. UniProtKB
metal ion binding IEA: Inferred from Electronic Annotation
with EBI:KW-0479
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB

Computational Biological Process
Annotation(s) Evidence Reference(s) Assigned By
inositol biosynthetic process IEA: Inferred from Electronic Annotation
with UniPathway:UPA00823
Last updated 2013-03-02
UniProt-GOA  (2012) Gene Ontology annotation based on UniPathway vocabulary mapping. UniPathway
phosphatidylinositol phosphorylation IEA: Inferred from Electronic Annotation
with EBI:IPR020550, EBI:IPR000760
Last updated 2013-03-02
DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms. InterPro

*** Computational GO Annotations are predictions. These annotations are NOT reviewed by a curator. Currently, all computational GO annotations for S. cerevisiae are assigned by an external source (for example, the Gene Ontology Annotation (GOA) project of the European Bioinformatics Institute (EBI)).