PDS1/YDR113C Gene Ontology Annotations Help

This page displays GO annotations in different sections according to the annotation method used to add that annotation to SGD.

PDS1 Manually curated*:

Last Reviewed on: 2002-11-04    Molecular Function | Biological Process | Cellular Component

Manually curated Molecular Function
Annotation(s) Evidence Reference(s) Assigned By
enzyme binding IPI: Inferred from Physical Interaction
with SGD:ESP1
Assigned on 2011-02-03
Jensen S, et al.  (2001) A novel role of the budding yeast separin Esp1 in anaphase spindle elongation: evidence that proper spindle association of Esp1 is regulated by Pds1. J Cell Biol 152(1):27-40 SGD
IPI: Inferred from Physical Interaction
with SGD:ESP1
Assigned on 2011-02-03
Ciosk R, et al.  (1998) An ESP1/PDS1 complex regulates loss of sister chromatid cohesion at the metaphase to anaphase transition in yeast. Cell 93(6):1067-76 SGD

Manually curated Biological Process
Annotation(s) Evidence Reference(s) Assigned By
meiosis I IMP: Inferred from Mutant Phenotype
Assigned on 2009-04-17
Cooper KF, et al.  (2009) Pds1p Is Required for Meiotic Recombination and Prophase I Progression in Saccharomyces cerevisiae. Genetics 181(1):65-79 SGD
mitotic sister chromatid segregation IMP: Inferred from Mutant Phenotype
Assigned on 2002-08-08
IPI: Inferred from Physical Interaction
Assigned on 2002-08-08
Ciosk R, et al.  (1998) An ESP1/PDS1 complex regulates loss of sister chromatid cohesion at the metaphase to anaphase transition in yeast. Cell 93(6):1067-76 SGD
protein localization IMP: Inferred from Mutant Phenotype
Assigned on 2008-02-18
Jensen S, et al.  (2001) A novel role of the budding yeast separin Esp1 in anaphase spindle elongation: evidence that proper spindle association of Esp1 is regulated by Pds1. J Cell Biol 152(1):27-40 SGD
recombinational repair IGI: Inferred from Genetic Interaction
with SGD:RAD51, SGD:RAD9
Assigned on 2005-06-13
IMP: Inferred from Mutant Phenotype
Assigned on 2005-06-13
DeMase D, et al.  (2005) The Saccharomyces cerevisiae PDS1 and RAD9 checkpoint genes control different DNA double-strand break repair pathways. DNA Repair (Amst) 4(1):59-69 SGD

Manually curated Cellular Component
Annotation(s) Evidence Reference(s) Assigned By
cytoplasm IDA: Inferred from Direct Assay
Assigned on 2009-06-22
Kosugi S, et al.  (2009) Systematic identification of cell cycle-dependent yeast nucleocytoplasmic shuttling proteins by prediction of composite motifs. Proc Natl Acad Sci U S A 106(25):10171-6 SGD
nucleus IDA: Inferred from Direct Assay
Assigned on 2009-06-22
Kosugi S, et al.  (2009) Systematic identification of cell cycle-dependent yeast nucleocytoplasmic shuttling proteins by prediction of composite motifs. Proc Natl Acad Sci U S A 106(25):10171-6 SGD
IDA: Inferred from Direct Assay
Assigned on 2002-08-08
Jensen S, et al.  (2001) A novel role of the budding yeast separin Esp1 in anaphase spindle elongation: evidence that proper spindle association of Esp1 is regulated by Pds1. J Cell Biol 152(1):27-40 SGD
spindle IDA: Inferred from Direct Assay
Assigned on 2002-08-08
Jensen S, et al.  (2001) A novel role of the budding yeast separin Esp1 in anaphase spindle elongation: evidence that proper spindle association of Esp1 is regulated by Pds1. J Cell Biol 152(1):27-40 SGD

* Manually curated GO annotations reflect our best understanding of the basic molecular function, biological process, and cellular component for this gene product. Manually curated annotations are assigned by SGD curators based on published papers when available, or by curatorial statements if necessary. Curators periodically review all Manually curated GO annotations for accuracy and completeness. The "Last Reviewed on:" date at the top of this section indicates when these annotations were last reviewed.


PDS1 High-throughput**:


There are no High-throughput annotations for PDS1

** GO annotations from High-throughput experiments are made based on a variety of large scale high-throughput experiments, including genome-wide experiments. Many of these annotations are made based on GO annotations (or mappings to GO annotations) assigned by the authors, rather than SGD curators. While SGD curators read these publications and often work closely with authors to incorporate the information, each individual annotation may not necessarily be reviewed by a curator. GO Annotations from high-throughput experiments will be assigned only when this type of data is available, and thus may not be assigned in all three aspects of the Gene Ontologies.


PDS1 Computational***:

Biological Process | Cellular Component

Computational Biological Process
Annotation(s) Evidence Reference(s) Assigned By
cell cycle IEA: Inferred from Electronic Annotation
with EBI:KW-0131
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
cell division IEA: Inferred from Electronic Annotation
with EBI:KW-0132
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
chromosome organization IEA: Inferred from Electronic Annotation
with EBI:IPR006940
Last updated 2013-03-02
DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms. InterPro
chromosome segregation IEA: Inferred from Electronic Annotation
with EBI:KW-0159
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
DNA metabolic process IEA: Inferred from Electronic Annotation
with EBI:IPR006940
Last updated 2013-03-02
DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms. InterPro
mitosis IEA: Inferred from Electronic Annotation
with EBI:KW-0498
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB

Computational Cellular Component
Annotation(s) Evidence Reference(s) Assigned By
cytoplasm IEA: Inferred from Electronic Annotation
with EBI:IPR006940
Last updated 2013-03-02
DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms. InterPro
IEA: Inferred from Electronic Annotation
with EBI:SL-0086
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on the manual assignment of UniProtKB Subcellular Location terms in UniProtKB/Swiss-Prot entries. UniProtKB
IEA: Inferred from Electronic Annotation
with EBI:KW-0963
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
nucleus IEA: Inferred from Electronic Annotation
with EBI:IPR006940
Last updated 2013-03-02
DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms. InterPro
IEA: Inferred from Electronic Annotation
with EBI:SL-0191
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on the manual assignment of UniProtKB Subcellular Location terms in UniProtKB/Swiss-Prot entries. UniProtKB
IEA: Inferred from Electronic Annotation
with EBI:KW-0539
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB

*** Computational GO Annotations are predictions. These annotations are NOT reviewed by a curator. Currently, all computational GO annotations for S. cerevisiae are assigned by an external source (for example, the Gene Ontology Annotation (GOA) project of the European Bioinformatics Institute (EBI)).