GRX3/YDR098C Gene Ontology Annotations Help

This page displays GO annotations in different sections according to the annotation method used to add that annotation to SGD.

GRX3 Manually curated*:

Last Reviewed on: 2007-03-01    Molecular Function | Biological Process | Cellular Component

Manually curated Molecular Function
Annotation(s) Evidence Reference(s) Assigned By
disulfide oxidoreductase activity IGI: Inferred from Genetic Interaction
Assigned on 2002-04-16
ISS: Inferred from Sequence or structural Similarity
Assigned on 2002-04-16
IMP: Inferred from Mutant Phenotype
Assigned on 2002-04-16
Rodriguez-Manzaneque MT, et al.  (1999) Grx5 glutaredoxin plays a central role in protection against protein oxidative damage in Saccharomyces cerevisiae. Mol Cell Biol 19(12):8180-90 SGD

Manually curated Biological Process
Annotation(s) Evidence Reference(s) Assigned By
actin cytoskeleton organization IMP: Inferred from Mutant Phenotype
Assigned on 2011-03-18
Pujol-Carrion N and de la Torre-Ruiz MA  (2010) Glutaredoxins Grx4 and Grx3 of Saccharomyces cerevisiae Play a Role in Actin Dynamics through Their Trx Domains, Which Contributes to Oxidative Stress Resistance. Appl Environ Microbiol 76(23):7826-7835 SGD
cellular iron ion homeostasis IGI: Inferred from Genetic Interaction
with SGD:AFT1
Assigned on 2007-03-01
IPI: Inferred from Physical Interaction
with SGD:AFT1
Assigned on 2007-03-01
Pujol-Carrion N, et al.  (2006) Glutaredoxins Grx3 and Grx4 regulate nuclear localisation of Aft1 and the oxidative stress response in Saccharomyces cerevisiae. J Cell Sci 119(Pt 21):4554-64 SGD
cellular response to oxidative stress IMP: Inferred from Mutant Phenotype
Assigned on 2007-03-01
Pujol-Carrion N, et al.  (2006) Glutaredoxins Grx3 and Grx4 regulate nuclear localisation of Aft1 and the oxidative stress response in Saccharomyces cerevisiae. J Cell Sci 119(Pt 21):4554-64 SGD
IGI: Inferred from Genetic Interaction
Assigned on 2001-01-18
IMP: Inferred from Mutant Phenotype
Assigned on 2001-01-18
Rodriguez-Manzaneque MT, et al.  (1999) Grx5 glutaredoxin plays a central role in protection against protein oxidative damage in Saccharomyces cerevisiae. Mol Cell Biol 19(12):8180-90 SGD

Manually curated Cellular Component
Annotation(s) Evidence Reference(s) Assigned By
cytosol IDA: Inferred from Direct Assay
Assigned on 2008-04-04
Kumanovics A, et al.  (2008) Identification of FRA1 and FRA2 as Genes Involved in Regulating the Yeast Iron Regulon in Response to Decreased Mitochondrial Iron-Sulfur Cluster Synthesis. J Biol Chem 283(16):10276-86 SGD
nucleus IDA: Inferred from Direct Assay
Assigned on 2005-01-26
Molina MM, et al.  (2004) Nuclear monothiol glutaredoxins of Saccharomyces cerevisiae can function as mitochondrial glutaredoxins. J Biol Chem 279(50):51923-30 SGD
IGI: Inferred from Genetic Interaction
Assigned on 2007-03-01
IPI: Inferred from Physical Interaction
Assigned on 2007-03-01
Pujol-Carrion N, et al.  (2006) Glutaredoxins Grx3 and Grx4 regulate nuclear localisation of Aft1 and the oxidative stress response in Saccharomyces cerevisiae. J Cell Sci 119(Pt 21):4554-64 SGD

* Manually curated GO annotations reflect our best understanding of the basic molecular function, biological process, and cellular component for this gene product. Manually curated annotations are assigned by SGD curators based on published papers when available, or by curatorial statements if necessary. Curators periodically review all Manually curated GO annotations for accuracy and completeness. The "Last Reviewed on:" date at the top of this section indicates when these annotations were last reviewed.


GRX3 High-throughput**:


There are no High-throughput annotations for GRX3

** GO annotations from High-throughput experiments are made based on a variety of large scale high-throughput experiments, including genome-wide experiments. Many of these annotations are made based on GO annotations (or mappings to GO annotations) assigned by the authors, rather than SGD curators. While SGD curators read these publications and often work closely with authors to incorporate the information, each individual annotation may not necessarily be reviewed by a curator. GO Annotations from high-throughput experiments will be assigned only when this type of data is available, and thus may not be assigned in all three aspects of the Gene Ontologies.


GRX3 Computational***:

Molecular Function | Biological Process

Computational Molecular Function
Annotation(s) Evidence Reference(s) Assigned By
2 iron, 2 sulfur cluster binding IEA: Inferred from Electronic Annotation
with EBI:KW-0001
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
electron carrier activity IEA: Inferred from Electronic Annotation
with EBI:IPR002109
Last updated 2013-03-02
DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms. InterPro
iron-sulfur cluster binding IEA: Inferred from Electronic Annotation
with EBI:KW-0411
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
metal ion binding IEA: Inferred from Electronic Annotation
with EBI:KW-0479
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
protein disulfide oxidoreductase activity IEA: Inferred from Electronic Annotation
with EBI:IPR002109
Last updated 2013-03-02
DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms. InterPro

Computational Biological Process
Annotation(s) Evidence Reference(s) Assigned By
cell redox homeostasis IEA: Inferred from Electronic Annotation
with EBI:IPR002109, EBI:IPR013766
Last updated 2013-03-02
DDB, et al.  (2001) Gene Ontology annotation through association of InterPro records with GO terms. InterPro

*** Computational GO Annotations are predictions. These annotations are NOT reviewed by a curator. Currently, all computational GO annotations for S. cerevisiae are assigned by an external source (for example, the Gene Ontology Annotation (GOA) project of the European Bioinformatics Institute (EBI)).