OCA6/YDR067C Gene Ontology Annotations Help

This page displays GO annotations in different sections according to the annotation method used to add that annotation to SGD.

OCA6 Manually curated*:

Last Reviewed on: 2003-10-28    Molecular Function | Biological Process

Manually curated Molecular Function
Annotation(s) Evidence Reference(s) Assigned By
molecular_function
unknown
ND: No Biological Data Available
Assigned on 2002-11-26
SGD  (2002) Use of the ND evidence code for Gene Ontology (GO) terms in SGD () SGD

Manually curated Biological Process
Annotation(s) Evidence Reference(s) Assigned By
biological_process
unknown
ND: No Biological Data Available
Assigned on 2002-11-26
SGD  (2002) Use of the ND evidence code for Gene Ontology (GO) terms in SGD () SGD

* Manually curated GO annotations reflect our best understanding of the basic molecular function, biological process, and cellular component for this gene product. Manually curated annotations are assigned by SGD curators based on published papers when available, or by curatorial statements if necessary. Curators periodically review all Manually curated GO annotations for accuracy and completeness. The "Last Reviewed on:" date at the top of this section indicates when these annotations were last reviewed.


OCA6 High-throughput**:

Cellular Component

High-throughput Cellular Component
Annotation(s) Evidence Reference(s) Assigned By
cytoplasm IDA: Inferred from Direct Assay
Assigned on 2003-10-28
Huh WK, et al.  (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 SGD

** GO annotations from High-throughput experiments are made based on a variety of large scale high-throughput experiments, including genome-wide experiments. Many of these annotations are made based on GO annotations (or mappings to GO annotations) assigned by the authors, rather than SGD curators. While SGD curators read these publications and often work closely with authors to incorporate the information, each individual annotation may not necessarily be reviewed by a curator. GO Annotations from high-throughput experiments will be assigned only when this type of data is available, and thus may not be assigned in all three aspects of the Gene Ontologies.


OCA6 Computational***:

Molecular Function | Biological Process | Cellular Component

Computational Molecular Function
Annotation(s) Evidence Reference(s) Assigned By
hydrolase activity IEA: Inferred from Electronic Annotation
with EBI:KW-0378
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
phosphoprotein phosphatase activity IEA: Inferred from Electronic Annotation
with EBI:KW-0904
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB
protein tyrosine phosphatase activity IEA: Inferred from Electronic Annotation
with IUBMB:3.1.3.48
Last updated 2013-03-02
GOA curators and MGI curators  (2001) Gene Ontology annotation based on Enzyme Commission mapping. UniProtKB

Computational Biological Process
Annotation(s) Evidence Reference(s) Assigned By
peptidyl-tyrosine dephosphorylation IEA: Inferred from Electronic Annotation
with IUBMB:3.1.3.48
Last updated 2013-03-02
GOA curators and MGI curators  (2001) Gene Ontology annotation based on Enzyme Commission mapping. GOC

Computational Cellular Component
Annotation(s) Evidence Reference(s) Assigned By
cytoplasm IEA: Inferred from Electronic Annotation
with EBI:SL-0086
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on the manual assignment of UniProtKB Subcellular Location terms in UniProtKB/Swiss-Prot entries. UniProtKB
IEA: Inferred from Electronic Annotation
with EBI:KW-0963
Last updated 2013-03-02
UniProt-GOA  (2011) Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries. UniProtKB

*** Computational GO Annotations are predictions. These annotations are NOT reviewed by a curator. Currently, all computational GO annotations for S. cerevisiae are assigned by an external source (for example, the Gene Ontology Annotation (GOA) project of the European Bioinformatics Institute (EBI)).