Fungal Sequence Alignment

This page displays a Saccharomyces cerevisiae protein in a ClustalW alignment with identified orthologs in other fungal species.

Currently, this page displays other fungal sequences from Cliften et al. and Kellis et al. We will soon include sequences from other fungal genomes from a variety of sources.

ClustalW Protein Alignment and Sequence for YOL008W and Homologs

Symbols:		* = identical		: = strong similarity		. = weak similarity

SGD_Scer_COQ10/YOL008W 1 M V L I I R P S Q T L I L F R K A M L K P I G R Y P L K R N F F G L S - G T N H T I R E Q R Y V L R 49

MIT_Sbay_c641_22547 1 M V S I T T C L Q T S A L L R R A A L K P V P R C P F K R H F F G L G - T S N H A I R E Q R Y V L R 49

MIT_Smik_c60_19315 1 M V S M I R G L Q I S I L F R K A M L K P I V R Y P L R R T F F G L S - T T N H A I R E Q R Y V L R 49

MIT_Spar_c373_20272 1 M V L V I R A L Q T S I V F R K A M L K P I V R Y P L K R S F F G L S - S T N H T I R E Q R Y V L R 49

WashU_Sbay_Contig614.36 1 M V S I T T C L Q T S A L L R R A A L K P V P R C P F K R H F F G L G - T S N H A I R E Q R Y V L R 49

WashU_Scas_Contig644.12 1 - - - - M S I I S V H C T L L K K V Y G K S L G T V G R R N L F G L S - L G S P E V K E Q R Y T L L 45

WashU_Sklu_Contig2419.5 1 - M A N V L V R V S L Q R I A L P G P K S V S N T V F R R S L F G L S N H S F N N T R E Q R Y V L C 49

WashU_Skud_Contig1977.10 1 M V L R E G C L Q T S T L F R K A V F K P I V R S P F K R H F F G L G - A T N H V I R E Q R Y V L R 49

WashU_Smik_Contig1316.2 1 M V S M I R G L Q I S I L F R K A M L K P I V R Y P L R R T F F G L S - T T N H A I R E Q R Y V L R 49

Symbols : : * : * * * . : * * * * . *

SGD_Scer_COQ10/YOL008W 50 K A I N A P P S T V Y A A V S E V A Q Y K E F I P Y C V D S F V D K R N P V D N K P L I A G L R V G 99

MIT_Sbay_c641_22547 50 K T I N T H P S T V Y A A V S E V S E Y K E F I P Y C I D S F V D K R N P V D N K P L I A G L R V G 99

MIT_Smik_c60_19315 50 K T I N A P P S I I Y A A V S E V S Q Y K E F I P Y C T D S F V D K R N P A D N K P V I G G L R V G 99

MIT_Spar_c373_20272 50 K T I N T P P S T V Y A A V S E V A Q Y K E F I P Y C V D S F V D K R N P V D N K P V I G G L R V G 99

WashU_Sbay_Contig614.36 50 K T I N T H P S T V Y A A V S E V S E Y K E F I P Y C I D S F V D K R N P V D N K P L I A G L R V G 99

WashU_Scas_Contig644.12 46 K T I N S P P T D V Y N V V S E V S Q Y Y K F I P Y C T E S F V E K R N L L D G K P T I A G L R V G 95

WashU_Sklu_Contig2419.5 50 K T I N A P T V N V Y E V V S E V S Q Y K E F M P Y C V E S F V N K R N Q D T G K P V E A G L M I S 99

WashU_Skud_Contig1977.10 50 K T I N T H P S T I Y A A V S E V S E Y K E F I P Y C V D S F V D K R N P V D K K P V I A G L R V G 99

WashU_Smik_Contig1316.2 50 K T I N A P P S I I Y A A V S E V S Q Y K E F I P Y C T D S F V D K R N P A D N K P V I G G L R V G 99

Symbols * : * * : . : * . * * * * : : * : * : * * * : * * * : * * * * * . * * : .

SGD_Scer_COQ10/YOL008W 100 F K Q Y D E E F I C N V T C K D T D H - - - T Y T V V A E T I S H N L F H L L I S K W T I M P H P N 146

MIT_Sbay_c641_22547 100 F K Q Y D E K F S C N V S C K E K V N G D N T Y T V V A E T I S H N L Y D L L Y S K W T I M P H P T 149

MIT_Smik_c60_19315 100 F K Q Y D E E F I C N V T C K D M I N G D D A Y T V V A E T V S H N L F H L L Y S K W T I M P H P T 149

MIT_Spar_c373_20272 100 F K Q Y D E E F I C N I T C K D T A N G N D T Y T V I A E T V S H N L F H L L Y S K W T I M P H P S 149

WashU_Sbay_Contig614.36 100 F K Q Y D E K F S C N V S C K E K V N G D N T Y T V V A E T I S H N L Y D L L Y S K W T I M P H P T 149

WashU_Scas_Contig644.12 96 F K Q Y D E K F V C E V S C K D L L A D R - D F T V E A N S L S H N L F H L L Y S K W T I R P H P R 144

WashU_Sklu_Contig2419.5 100 F K H Y V E K F V C K V E C D S K L E G - - I K T V V A E S L T H T L F D L L Y T K W T I A P H P T 147

WashU_Skud_Contig1977.10 100 F K Q Y D E E F I C N V T C K E K V N G D D I Y T V V A E T V S H N L F H L L Y S K W T I M P H P T 149

WashU_Smik_Contig1316.2 100 F K Q Y D E E F I C N V T C K D M I N G D D A Y T V V A E T V S H N L F H L L Y S K W T I M P H P T 149

Symbols * * : * * : * * : : * . . * * * : : : : * . * : . * * : * * * * * * *

SGD_Scer_COQ10/YOL008W 147 R P N A A M V E L L L R F K F K S R I Y N S V S L I F A K T V T E L V M N A F A K R A Y H L V R L A 196

MIT_Sbay_c641_22547 150 R P N A T M V E L L L R F K F K S R L Y N S V S L I F A K T V T E L V M N A F A K R A Y H L V R L T 199

MIT_Smik_c60_19315 150 R P N A T M V E L L L R F K F K S R L Y N S V S Q I F A K T V T E L V M N A F A K R A Y N S V R L A 199

MIT_Spar_c373_20272 150 R P N A A M V E L L L R F K F K S R I Y N S V S L I F A K T V T E L V M N A F A K R A Y H L V R L A 199

WashU_Sbay_Contig614.36 150 R P N A T M V E L L L R F K F K S R L Y N S V S L I F A K T V T E L V M N A F A K R A Y H L V R L T 199

WashU_Scas_Contig644.12 145 R P Q T T E V E L S L R F K F K S R L Y N A V S S I F A K S V T K L V M D A F E K R V F E L K R L D 194

WashU_Sklu_Contig2419.5 148 R P N V T E V E L L L R F K F H S K L Y N S I S S I F A K S V T G L V M K A F E K R I F Q L K K E S 197

WashU_Skud_Contig1977.10 150 R P N A A M V E L L L R F K F K S R I Y N S V S L L F A K T V T E L V M N A F A K R A Y H L V R L A 199

WashU_Smik_Contig1316.2 150 R P N A T M V E L L L R F K F K S R L Y N S V S Q I F A K T V T E L V M N A F A K R A Y N S V R L A 199

Symbols * * : . : * * * * * * * * : * : : * * : : * : * * * : * * * * * . * * * * : . :

SGD_Scer_COQ10/YOL008W 197 M L K P S S K E G S P - - - - - 207

MIT_Sbay_c641_22547 200 M L K S S S K E T H S - - - - - 210

MIT_Smik_c60_19315 200 M L K P P S K E S S S - - - - - 210

MIT_Spar_c373_20272 200 M L K P S S K E S S Q - - - - - 210

WashU_Sbay_Contig614.36 200 M L K S S S K E T H S - - - - - 210

WashU_Scas_Contig644.12 195 P L K S V S S S S S S S S R D Y 210

WashU_Sklu_Contig2419.5 198 M K V K K G L S - - - - - - - - 205

WashU_Skud_Contig1977.10 200 M L K P T S K E S S S - - - - - 210

WashU_Smik_Contig1316.2 200 M L K P P S K E S S S - - - - - 210

Symbols . .

Symbols:		* = identical		: = strong similarity		. = weak similarity

Protein Sequence for SGD_Scer_COQ10/YOL008W:

SGD_Scer_COQ10/YOL008W  Length: 208  Fri Jan  6 19:50:21 2012  Type: P  Check: 3718  ..

       1  MVLIIRPSQT LILFRKAMLK PIGRYPLKRN FFGLSGTNHT IREQRYVLRK

      51  AINAPPSTVY AAVSEVAQYK EFIPYCVDSF VDKRNPVDNK PLIAGLRVGF

     101  KQYDEEFICN VTCKDTDHTY TVVAETISHN LFHLLISKWT IMPHPNRPNA

     151  AMVELLLRFK FKSRIYNSVS LIFAKTVTEL VMNAFAKRAY HLVRLAMLKP

     201  SSKEGSP*

Protein Sequence for MIT_Sbay_c641_22547:

MIT_Sbay_c641_22547  Length: 211  Fri Jan  6 19:50:21 2012  Type: P  Check: 5335  ..

       1  MVSITTCLQT SALLRRAALK PVPRCPFKRH FFGLGTSNHA IREQRYVLRK

      51  TINTHPSTVY AAVSEVSEYK EFIPYCIDSF VDKRNPVDNK PLIAGLRVGF

     101  KQYDEKFSCN VSCKEKVNGD NTYTVVAETI SHNLYDLLYS KWTIMPHPTR

     151  PNATMVELLL RFKFKSRLYN SVSLIFAKTV TELVMNAFAK RAYHLVRLTM

     201  LKSSSKETHS *

Protein Sequence for MIT_Smik_c60_19315:

MIT_Smik_c60_19315  Length: 211  Fri Jan  6 19:50:21 2012  Type: P  Check: 5431  ..

       1  MVSMIRGLQI SILFRKAMLK PIVRYPLRRT FFGLSTTNHA IREQRYVLRK

      51  TINAPPSIIY AAVSEVSQYK EFIPYCTDSF VDKRNPADNK PVIGGLRVGF

     101  KQYDEEFICN VTCKDMINGD DAYTVVAETV SHNLFHLLYS KWTIMPHPTR

     151  PNATMVELLL RFKFKSRLYN SVSQIFAKTV TELVMNAFAK RAYNSVRLAM

     201  LKPPSKESSS *

Protein Sequence for MIT_Spar_c373_20272:

MIT_Spar_c373_20272  Length: 211  Fri Jan  6 19:50:22 2012  Type: P  Check: 5782  ..

       1  MVLVIRALQT SIVFRKAMLK PIVRYPLKRS FFGLSSTNHT IREQRYVLRK

      51  TINTPPSTVY AAVSEVAQYK EFIPYCVDSF VDKRNPVDNK PVIGGLRVGF

     101  KQYDEEFICN ITCKDTANGN DTYTVIAETV SHNLFHLLYS KWTIMPHPSR

     151  PNAAMVELLL RFKFKSRIYN SVSLIFAKTV TELVMNAFAK RAYHLVRLAM

     201  LKPSSKESSQ *

Protein Sequence for WashU_Sbay_Contig614.36:

WashU_Sbay_Contig614.36  Length: 211  Fri Jan  6 19:50:22 2012  Type: P  Check: 5335  ..

       1  MVSITTCLQT SALLRRAALK PVPRCPFKRH FFGLGTSNHA IREQRYVLRK

      51  TINTHPSTVY AAVSEVSEYK EFIPYCIDSF VDKRNPVDNK PLIAGLRVGF

     101  KQYDEKFSCN VSCKEKVNGD NTYTVVAETI SHNLYDLLYS KWTIMPHPTR

     151  PNATMVELLL RFKFKSRLYN SVSLIFAKTV TELVMNAFAK RAYHLVRLTM

     201  LKSSSKETHS *

Protein Sequence for WashU_Scas_Contig644.12:

WashU_Scas_Contig644.12  Length: 211  Fri Jan  6 19:50:22 2012  Type: P  Check: 7279  ..

       1  MSIISVHCTL LKKVYGKSLG TVGRRNLFGL SLGSPEVKEQ RYTLLKTINS

      51  PPTDVYNVVS EVSQYYKFIP YCTESFVEKR NLLDGKPTIA GLRVGFKQYD

     101  EKFVCEVSCK DLLADRDFTV EANSLSHNLF HLLYSKWTIR PHPRRPQTTE

     151  VELSLRFKFK SRLYNAVSSI FAKSVTKLVM DAFEKRVFEL KRLDPLKSVS

     201  SSSSSSSRDY *

Protein Sequence for WashU_Sklu_Contig2419.5:

WashU_Sklu_Contig2419.5  Length: 206  Fri Jan  6 19:50:22 2012  Type: P  Check: 577  ..

       1  MANVLVRVSL QRIALPGPKS VSNTVFRRSL FGLSNHSFNN TREQRYVLCK

      51  TINAPTVNVY EVVSEVSQYK EFMPYCVESF VNKRNQDTGK PVEAGLMISF

     101  KHYVEKFVCK VECDSKLEGI KTVVAESLTH TLFDLLYTKW TIAPHPTRPN

     151  VTEVELLLRF KFHSKLYNSI SSIFAKSVTG LVMKAFEKRI FQLKKESMKV

     201  KKGLS*

Protein Sequence for WashU_Skud_Contig1977.10:

WashU_Skud_Contig1977.10  Length: 211  Fri Jan  6 19:50:22 2012  Type: P  Check: 4292  ..

       1  MVLREGCLQT STLFRKAVFK PIVRSPFKRH FFGLGATNHV IREQRYVLRK

      51  TINTHPSTIY AAVSEVSEYK EFIPYCVDSF VDKRNPVDKK PVIAGLRVGF

     101  KQYDEEFICN VTCKEKVNGD DIYTVVAETV SHNLFHLLYS KWTIMPHPTR

     151  PNAAMVELLL RFKFKSRIYN SVSLLFAKTV TELVMNAFAK RAYHLVRLAM

     201  LKPTSKESSS *

Protein Sequence for WashU_Smik_Contig1316.2:

WashU_Smik_Contig1316.2  Length: 211  Fri Jan  6 19:50:22 2012  Type: P  Check: 5431  ..

       1  MVSMIRGLQI SILFRKAMLK PIVRYPLRRT FFGLSTTNHA IREQRYVLRK

      51  TINAPPSIIY AAVSEVSQYK EFIPYCTDSF VDKRNPADNK PVIGGLRVGF

     101  KQYDEEFICN VTCKDMINGD DAYTVVAETV SHNLFHLLYS KWTIMPHPTR

     151  PNATMVELLL RFKFKSRLYN SVSQIFAKTV TELVMNAFAK RAYNSVRLAM

     201  LKPPSKESSS *

Permission to use the information contained in this database was given by the researchers/institutes who contributed or published the information. Users of the database are solely responsible for compliance with any copyright restrictions, including those applying to the author abstracts. Documents from this server are provided "AS-IS" without any warranty, expressed or implied. The SGD project at Stanford University is supported by a Genome Research Resource Grant from the US National Human Genome Research Institute, part of the US National Institutes of Health.

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