Fungal Sequence Alignment

This page displays a Saccharomyces cerevisiae protein in a ClustalW alignment with identified orthologs in other fungal species.

Currently, this page displays other fungal sequences from Cliften et al. and Kellis et al. We will soon include sequences from other fungal genomes from a variety of sources.

ClustalW Protein Alignment and Sequence for YGR259C and Homologs

Symbols:		* = identical		: = strong similarity		. = weak similarity

SGD_Scer_YGR259C 1 - - - - - - - - - - - - - - - - - M G S K R T Y V A K K T V T H V L Y C V P T R W I S L D R P A T S 33

MIT_Sbay_c706_9528 1 M S I L R K T C F S I G W E G D G I P S S S V V V A M I S L S R A R S D F L S W L R L C K S A S R A 50

MIT_Spar_c291_9351 1 - M I F R R L V P - - - - - - - - M G S K S T Y V A K K T V T H V L Y C V P T R L M S L D R P A T S 41

Symbols : * . . * * : : : : . . : . . : :

SGD_Scer_YGR259C 34 A L P I F D L S R L E R K Y S I P I R G I K Y I S I L R K T R F S I G W E G E G M P S S S V V V A I 83

MIT_Sbay_c706_9528 51 S S S W K V I A V G F P S E S S L V A D I K S T S S T K S L G D F I A N L L A I Y M - - - - - - - - 92

MIT_Spar_c291_9351 42 A L P I F D L S K L E R K Y S S P I S G I K - - - - - - - - - - - - - - - - - - - - - - - - - - - - 63

Symbols : . : : . * : . * *

SGD_Scer_YGR259C 84 I S R S V A S S D F L S W L R L C K L A S W P S S S W N V T S V G F S S D P S L V G D M K S T S S T 133

MIT_Sbay_c706_9528 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

MIT_Spar_c291_9351 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Symbols

SGD_Scer_YGR259C 134 K C L G D S I V N L L L I 146

MIT_Sbay_c706_9528 - - - - - - - - - - - - -

MIT_Spar_c291_9351 - - - - - - - - - - - - -

Symbols

Symbols:		* = identical		: = strong similarity		. = weak similarity

Protein Sequence for SGD_Scer_YGR259C:

SGD_Scer_YGR259C  Length: 147  Sat Dec 10 12:12:32 2011  Type: P  Check: 1189  ..

       1  MGSKRTYVAK KTVTHVLYCV PTRWISLDRP ATSALPIFDL SRLERKYSIP

      51  IRGIKYISIL RKTRFSIGWE GEGMPSSSVV VAIISRSVAS SDFLSWLRLC

     101  KLASWPSSSW NVTSVGFSSD PSLVGDMKST SSTKCLGDSI VNLLLI*

Protein Sequence for MIT_Sbay_c706_9528:

MIT_Sbay_c706_9528  Length: 93  Sat Dec 10 12:12:33 2011  Type: P  Check: 8109  ..

       1  MSILRKTCFS IGWEGDGIPS SSVVVAMISL SRARSDFLSW LRLCKSASRA

      51  SSSWKVIAVG FPSESSLVAD IKSTSSTKSL GDFIANLLAI YM*

Protein Sequence for MIT_Spar_c291_9351:

MIT_Spar_c291_9351  Length: 64  Sat Dec 10 12:12:33 2011  Type: P  Check: 759  ..

       1  MIFRRLVPMG SKSTYVAKKT VTHVLYCVPT RLMSLDRPAT SALPIFDLSK

      51  LERKYSSPIS GIK*

Permission to use the information contained in this database was given by the researchers/institutes who contributed or published the information. Users of the database are solely responsible for compliance with any copyright restrictions, including those applying to the author abstracts. Documents from this server are provided "AS-IS" without any warranty, expressed or implied. The SGD project at Stanford University is supported by a Genome Research Resource Grant from the US National Human Genome Research Institute, part of the US National Institutes of Health.

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