Fungal Sequence Alignment

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This page displays a Saccharomyces cerevisiae protein in a ClustalW alignment with identified orthologs in other fungal species.

Currently, this page displays other fungal sequences from Cliften et al. and Kellis et al. We will soon include sequences from other fungal genomes from a variety of sources.

ClustalW Protein Alignment and Sequence for YGR257C and Homologs

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Align selected sequences
selected sequences (FASTA format)


Symbols:
* = identical
: = strong similarity
. = weak similarity

SGD_Scer_MTM1/YGR257C   1   ------------------------MSDRNTSNSLTLKERMLSAGAGSVLT   26
MIT_Sbay_c704_9549   
   --------------------------------------------------   
MIT_Smik_c791_9157   1   ------------------------MSDRNTSNRLTLKERMLSAGTGSLLT   26
MIT_Spar_c291_9330   1   ------------------------MSDRNTSNSLTLKERMLSAGTGSVLT   26
WashU_Sbay_Contig653.56   1   ---------------------------------------MLSAGTGSVLT   11
WashU_Scas_Contig645.9   1   MERTRFKQNLDPESNLFLLESCNRAMSTNATDGLTLHQRMLSASTGSLLT   50
Symbols










SGD_Scer_MTM1/YGR257C   27   SLILTPMDVVRIRLQQQQMIPDCSCDGAAEVPNAVSSGSKMKTFTNVGGQ   76
MIT_Sbay_c704_9549   1   ------------------MIPGCSCDGAPEISNTVEAGSKLKPLTNVGGQ   32
MIT_Smik_c791_9157   27   SLILTPMDVVRIRLQQQQMIPDCSCDGAPELSSAVGSGSKLKTLTDVRGQ   76
MIT_Spar_c291_9330   27   SLILTPMDVVRIRLQQQQMIPDCSCDGPAEVSQAVSSGSKLKTFTNVGGQ   76
WashU_Sbay_Contig653.56   12   SLILTPMDVVRIRLQQQQMIPGCSCDGAPEISNTVEAGSKLKPLTNVGGQ   61
WashU_Scas_Contig645.9   51   SLTLTPMDVVRIRLQQQELLPDCSCETIAVKDFLPKAKTDLSSVQVSRAA   100
Symbols






::*.***: . : :.:... .



SGD_Scer_MTM1/YGR257C   77   NLNNA---KIFWESACFQELHCKNSSLKFNGTLEAFTKIASVEGITSLWR   123
MIT_Sbay_c704_9549   33   NLNNA---KIFWESACFQELHCKNSPLKFNGTLEAFAKIANVEGITSLWR   79
MIT_Smik_c791_9157   77   NLNNG---KIFWESACFQELHCKNSSLKFNGTLEAFTKIANVEGITSLWR   123
MIT_Spar_c291_9330   77   NLNNG---KIFWESACFQELHCKNSSLKFNGTLEAFTKIASVEGITSLWR   123
WashU_Sbay_Contig653.56   62   NLNNA---KIFWESACFQELHCKNSPLKFNGTLEAFAKIANVEGITSLWR   108
WashU_Scas_Contig645.9   101   TISTGNKNKVFWDNPCFQELNCKNSSVRFNGTLEAFNKIWKLEGITTLWR   150
Symbols






.:... *:**:..*****:****.::******** ** .:****:***



SGD_Scer_MTM1/YGR257C   124   GISLTLLMAIPANMVYFSGYEYIRDVSPIASTYPTLNPLFCGAIARVFAA   173
MIT_Sbay_c704_9549   80   GISLTLLMAIPANMVYFSGYEYIRDISPIATTYPTLNPLFCGAIARVFAA   129
MIT_Smik_c791_9157   124   GISLTLLMAIPANMVYFSGYEYIRDISPIASTYPTLNPLFCGAIARVFAA   173
MIT_Spar_c291_9330   124   GISLTLLMAIPANMVYFSGYEYIRDVSPIASTYPTLNPLFCGAIARVFAA   173
WashU_Sbay_Contig653.56   109   GISLTLLMAIPANMVYFSGYEYIRDISPIATTYPTLNPLFCGAIARVFAA   158
WashU_Scas_Contig645.9   151   GISINLLMAIPANIVYFTGYEYLRDNSPLATSSPTFNPLMCGAIARILAA   200
Symbols






***:.********:***:****:** **:*:: **:***:******::**



SGD_Scer_MTM1/YGR257C   174   TSIAPLELVKTKLQSIPRSSKSTKTWMMVKDLLNETRQEMKMVGPSRALF   223
MIT_Sbay_c704_9549   130   TSIAPLELAKTKLQSIPRSSKSTKTWMMVKDLISETRQEMKMVGPSRALF   179
MIT_Smik_c791_9157   174   TSVAPLELVKTKLQSIPRSSRSTKTWMMVKDLLNETRQEMKMVGPSRALF   223
MIT_Spar_c291_9330   174   TSIAPLELVKTKLQSIPRSSKSTKTWMMVKDLLDETRQEMKMVGPSRALF   223
WashU_Sbay_Contig653.56   159   TSIAPLELAKTKLQSIPRSSKSTKTWMMVKDLISETRQEMKMVGPSRALF   208
WashU_Scas_Contig645.9   201   STVAPLELLKTKLQSIPRVSKSTTSWMMVKELLKETRQEMRISGASNALF   250
Symbols






:::***** ********* *:**.:*****:*:.******:: *.*.***



SGD_Scer_MTM1/YGR257C   224   KGLEITLWRDVPFSAIYWSSYELCKERLWLDSTRFASKDANWVHFINSFA   273
MIT_Sbay_c704_9549   180   KGLEITLWRDVPFSAIYWSSYELCKENLWLDSNKYSRKDSNWIHFINSFA   229
MIT_Smik_c791_9157   224   KGLEITLWRDVPFSAIYWSSYELCKEKLWLDSSRYTSQNSNWIHFINSFA   273
MIT_Spar_c291_9330   224   KGLEITLWRDVPFSAIYWSSYELCKEKLWLDSTQFAPKDANWIHFINSFA   273
WashU_Sbay_Contig653.56   209   KGLEITLWRDVPFSAIYWSSYELCKENLWLDSNKYSRKDSNWIHFINSFA   258
WashU_Scas_Contig645.9   251   KGLEITLWRDVPFSAIYWGSYEFCKTHLWMDTSKS---HSNLTFFINSFI   297
Symbols






******************.***:** .**:*:.: .:* .*****



SGD_Scer_MTM1/YGR257C   274   SGCISGMIAAICTHPFDVGKTRWQISMMNNSD-----PKGGNRSRNMFKF   318
MIT_Sbay_c704_9549   230   SGCVSGMIAAICTHPFDVGKTRWQISMMNNGD-----SKRVNRSRNMFKF   274
MIT_Smik_c791_9157   274   SGCISGIVAAICTHPFDVGKTRWQISMMNNND-----PKGSNRSRNMFKF   318
MIT_Spar_c291_9330   274   SGCISGMIAAICTHPFDVGKTRWQISMMNNND-----SRGSNRSRNMFKF   318
WashU_Sbay_Contig653.56   259   SGCVSGMIAAICTHPFDVGKTRWQISMMNNGD-----SKRVNRSRNMFKF   303
WashU_Scas_Contig645.9   298   GGSISGTIAALVTHPFDVGKTRWQISFMGNNDKSVVKSPDIEQTKNMFKF   347
Symbols






.*.:** :**: **************:*.*.* . ::::*****



SGD_Scer_MTM1/YGR257C   319   LETIWRTEGLAALYTGLAARVIKIRPSCAIMISSYEISKKVFGNKLHQ   366
MIT_Sbay_c704_9549   275   LDTIRRREGFAALYTGLAARVIKIAPSCAIMISSYEISKNIFGDKLHQ   322
MIT_Smik_c791_9157   319   LETIWRKEGFAALYTGLAARVIKIAPSCAIMISSYEISKRIFGKKLHQ   366
MIT_Spar_c291_9330   319   LETIWRTEGLAALYTGLAARVIKIAPSCAIMISSYEISKKVFGNKLHQ   366
WashU_Sbay_Contig653.56   304   LDTIRRREGFAALYTGLAARVIKIAPSCAIMISSYEISKNIFGDKLHQ   351
WashU_Scas_Contig645.9   348   LRNIWKLEGWGALYTGLVPRMVKIAPSCAIMISSYELSKRLFNA----   391
Symbols






* .* : ** .******..*::** ***********:**.:*.



Symbols:
* = identical
: = strong similarity
. = weak similarity


- Download all sequences in alignment, in FASTA format.
GCG format sequences are displayed below.




Protein Sequence for SGD_Scer_MTM1/YGR257C:

SGD_Scer_MTM1/YGR257C  Length: 367  Sat Dec 10 12:11:25 2011  Type: P  Check: 5980  ..

       1  MSDRNTSNSL TLKERMLSAG AGSVLTSLIL TPMDVVRIRL QQQQMIPDCS

      51  CDGAAEVPNA VSSGSKMKTF TNVGGQNLNN AKIFWESACF QELHCKNSSL

     101  KFNGTLEAFT KIASVEGITS LWRGISLTLL MAIPANMVYF SGYEYIRDVS

     151  PIASTYPTLN PLFCGAIARV FAATSIAPLE LVKTKLQSIP RSSKSTKTWM

     201  MVKDLLNETR QEMKMVGPSR ALFKGLEITL WRDVPFSAIY WSSYELCKER

     251  LWLDSTRFAS KDANWVHFIN SFASGCISGM IAAICTHPFD VGKTRWQISM

     301  MNNSDPKGGN RSRNMFKFLE TIWRTEGLAA LYTGLAARVI KIRPSCAIMI

     351  SSYEISKKVF GNKLHQ*

Protein Sequence for MIT_Sbay_c704_9549:

MIT_Sbay_c704_9549  Length: 323  Sat Dec 10 12:11:25 2011  Type: P  Check: 9130  ..

       1  MIPGCSCDGA PEISNTVEAG SKLKPLTNVG GQNLNNAKIF WESACFQELH

      51  CKNSPLKFNG TLEAFAKIAN VEGITSLWRG ISLTLLMAIP ANMVYFSGYE

     101  YIRDISPIAT TYPTLNPLFC GAIARVFAAT SIAPLELAKT KLQSIPRSSK

     151  STKTWMMVKD LISETRQEMK MVGPSRALFK GLEITLWRDV PFSAIYWSSY

     201  ELCKENLWLD SNKYSRKDSN WIHFINSFAS GCVSGMIAAI CTHPFDVGKT

     251  RWQISMMNNG DSKRVNRSRN MFKFLDTIRR REGFAALYTG LAARVIKIAP

     301  SCAIMISSYE ISKNIFGDKL HQ*

Protein Sequence for MIT_Smik_c791_9157:

MIT_Smik_c791_9157  Length: 367  Sat Dec 10 12:11:25 2011  Type: P  Check: 7594  ..

       1  MSDRNTSNRL TLKERMLSAG TGSLLTSLIL TPMDVVRIRL QQQQMIPDCS

      51  CDGAPELSSA VGSGSKLKTL TDVRGQNLNN GKIFWESACF QELHCKNSSL

     101  KFNGTLEAFT KIANVEGITS LWRGISLTLL MAIPANMVYF SGYEYIRDIS

     151  PIASTYPTLN PLFCGAIARV FAATSVAPLE LVKTKLQSIP RSSRSTKTWM

     201  MVKDLLNETR QEMKMVGPSR ALFKGLEITL WRDVPFSAIY WSSYELCKEK

     251  LWLDSSRYTS QNSNWIHFIN SFASGCISGI VAAICTHPFD VGKTRWQISM

     301  MNNNDPKGSN RSRNMFKFLE TIWRKEGFAA LYTGLAARVI KIAPSCAIMI

     351  SSYEISKRIF GKKLHQ*

Protein Sequence for MIT_Spar_c291_9330:

MIT_Spar_c291_9330  Length: 367  Sat Dec 10 12:11:25 2011  Type: P  Check: 6592  ..

       1  MSDRNTSNSL TLKERMLSAG TGSVLTSLIL TPMDVVRIRL QQQQMIPDCS

      51  CDGPAEVSQA VSSGSKLKTF TNVGGQNLNN GKIFWESACF QELHCKNSSL

     101  KFNGTLEAFT KIASVEGITS LWRGISLTLL MAIPANMVYF SGYEYIRDVS

     151  PIASTYPTLN PLFCGAIARV FAATSIAPLE LVKTKLQSIP RSSKSTKTWM

     201  MVKDLLDETR QEMKMVGPSR ALFKGLEITL WRDVPFSAIY WSSYELCKEK

     251  LWLDSTQFAP KDANWIHFIN SFASGCISGM IAAICTHPFD VGKTRWQISM

     301  MNNNDSRGSN RSRNMFKFLE TIWRTEGLAA LYTGLAARVI KIAPSCAIMI

     351  SSYEISKKVF GNKLHQ*

Protein Sequence for WashU_Sbay_Contig653.56:

WashU_Sbay_Contig653.56  Length: 352  Sat Dec 10 12:11:25 2011  Type: P  Check: 9797  ..

       1  MLSAGTGSVL TSLILTPMDV VRIRLQQQQM IPGCSCDGAP EISNTVEAGS

      51  KLKPLTNVGG QNLNNAKIFW ESACFQELHC KNSPLKFNGT LEAFAKIANV

     101  EGITSLWRGI SLTLLMAIPA NMVYFSGYEY IRDISPIATT YPTLNPLFCG

     151  AIARVFAATS IAPLELAKTK LQSIPRSSKS TKTWMMVKDL ISETRQEMKM

     201  VGPSRALFKG LEITLWRDVP FSAIYWSSYE LCKENLWLDS NKYSRKDSNW

     251  IHFINSFASG CVSGMIAAIC THPFDVGKTR WQISMMNNGD SKRVNRSRNM

     301  FKFLDTIRRR EGFAALYTGL AARVIKIAPS CAIMISSYEI SKNIFGDKLH

     351  Q*

Protein Sequence for WashU_Scas_Contig645.9:

WashU_Scas_Contig645.9  Length: 392  Sat Dec 10 12:11:25 2011  Type: P  Check: 1761  ..

       1  MERTRFKQNL DPESNLFLLE SCNRAMSTNA TDGLTLHQRM LSASTGSLLT

      51  SLTLTPMDVV RIRLQQQELL PDCSCETIAV KDFLPKAKTD LSSVQVSRAA

     101  TISTGNKNKV FWDNPCFQEL NCKNSSVRFN GTLEAFNKIW KLEGITTLWR

     151  GISINLLMAI PANIVYFTGY EYLRDNSPLA TSSPTFNPLM CGAIARILAA

     201  STVAPLELLK TKLQSIPRVS KSTTSWMMVK ELLKETRQEM RISGASNALF

     251  KGLEITLWRD VPFSAIYWGS YEFCKTHLWM DTSKSHSNLT FFINSFIGGS

     301  ISGTIAALVT HPFDVGKTRW QISFMGNNDK SVVKSPDIEQ TKNMFKFLRN

     351  IWKLEGWGAL YTGLVPRMVK IAPSCAIMIS SYELSKRLFN A*