Fungal Sequence Alignment

Help

This page displays a Saccharomyces cerevisiae protein in a ClustalW alignment with identified orthologs in other fungal species.

Currently, this page displays other fungal sequences from Cliften et al. and Kellis et al. We will soon include sequences from other fungal genomes from a variety of sources.

ClustalW Protein Alignment and Sequence for YDR085C and Homologs

Choose two or more sequences for alignment:
Pick a sequence type:
Best Hits & Orthologs"Other" Hits

Select or unselect multiple options for sequence
name by pressing the Control (PC) or Command
(Mac) key while clicking.

Align selected sequences
selected sequences (FASTA format)


Symbols:
* = identical
: = strong similarity
. = weak similarity

SGD_Scer_AFR1/YDR085C   1   MEGSYLSAQENQPIPERLIPRSNSTSNLFALSSTFSKLNVRNDADYNYSN   50
MIT_Sbay_c902_21116   1   MERQYLSGQEDQPISERLVPRSNSTSNLFSLSSTFSKLNVRNDAEYNSFG   50
MIT_Spar_c127_4044   1   MEGSYLSSQENQPIPDRLIPRSNSTSNLFALSSTFSKLNVRNDAEYSYLG   50
WashU_Sbay_Contig660.60   1   MERQYLSGQEDQPISERLVPRSNSTSNLFSLSSTFSKLNVRNDAEYNSFG   50
WashU_Skud_Contig1929.6   1   MERSYLSAQEDQSIPERLVPRSNSTSNLFALSDTFSKLNVRNDGDYNSLG   50
Symbols






** .***.**:*.*.:**:**********:**.**********.:*. .



SGD_Scer_AFR1/YDR085C   51   PNKKRHIYSG---EIDCRSVTAARKFPVRSCSMTAAQQRKRTALFTVRER   97
MIT_Sbay_c902_21116   51   PNKKRHVH---RYENGQDPMTRTNSFPARSSSMTAAQRNNKTAFFTVKQR   97
MIT_Spar_c127_4044   51   PNKKRHIYNG---ETSRGSVAVDRNFPVRSSSMTAAQQRKRTALFTARER   97
WashU_Sbay_Contig660.60   51   PNKKRHVH---RYENGQDPMTRTNSFPARSSSMTAAQRNNKTAFFTVKQR   97
WashU_Skud_Contig1929.6   51   PNKKRHVYGDRMERMGYGSMVGTNGFPVRSSSMTAAQHERKTTLFTVK-R   99
Symbols






******:: . . .:. . **.**.******:..:*::**.: *



SGD_Scer_AFR1/YDR085C   98   NSYHEGFNNDQDYVSQYQKPQYTFGVYKELTPYQLQRSKMKRSFQFPNGE   147
MIT_Sbay_c902_21116   98   NSYHEGLNEDYYRQGQCQNPPNTARMYRKLTPYQIQRSKMKTSFRFPNGE   147
MIT_Spar_c127_4044   98   NSYHEGFNNDYNYANHYQNPRNTLAVYKELTPYQLQRSRMKTSFQFPNGE   147
WashU_Sbay_Contig660.60   98   NSYHEGLNEDYYRQGQCQNPPNTARMYRKLTPYQIQRSKMKTSFRFPNGE   147
WashU_Skud_Contig1929.6   100   NSYQEGLNKGHNYESQYQSAQNTLRVYGKLTPYQLQRSKMRTSFRFPNGE   149
Symbols






***:**:*:. .: *.. * :* :*****:***:*: **:*****



SGD_Scer_AFR1/YDR085C   148   IYKPKLDGKCTHSLKKPELNSRDSSLFKFSEKKGRNLSKDFVGPHNGTSV   197
MIT_Sbay_c902_21116   148   VFQPKPEGKNSTSSKKISLSSKNPFSFSFGQKGG-----SAPLEKFPAQV   192
MIT_Spar_c127_4044   148   IYKPKPDGKCSHSLRKASLNPRNSFLFKFSEKKDSSSSKDSVNPYNAASI   197
WashU_Sbay_Contig660.60   148   VFQPKPEGKNSTSSKKISLSSKNPFSFSFGQKGG-----SAPLEKFPAQV   192
WashU_Skud_Contig1929.6   150   IYKPRLDGKGSPTSKKGGLNSKSSFLFKFREREDSTLPEDSATSYNAAQI   199
Symbols






:::*: :** : : :* *..:.. *.* :: . . :.:



SGD_Scer_AFR1/YDR085C   198   IHIPPNDTGYGVNSLELNTSVPSTIKSSVSSTS----PISAVNTLTSLPE   243
MIT_Sbay_c902_21116   193   PSAPNTETFQDTNSLNSSSSVPSTTKSSIASSS----PISTVNTPTSCTE   238
MIT_Spar_c127_4044   198   LPTSHTDINDGLNSLELNTSVPSTIKGSLSSTS----PISAVNTLRSLTE   243
WashU_Sbay_Contig660.60   193   PSAPNTETFQDTNSLNSSSSVPSTTKSSIASSS----PISTVNTPTSCTE   238
WashU_Skud_Contig1929.6   200   PSLSNMDKNQDTNSLKSGSSVSSTAKSSIASSSPISSPISTVNTPTSFTE   249
Symbols






. : . ***: .:**.** *.*::*:* ***:*** * .*



SGD_Scer_AFR1/YDR085C   244   SQTDDDD-GYENKTVTISYCFENTVNEKHGSHIEKLDLSTKEKTKPTTNS   292
MIT_Sbay_c902_21116   239   SHTDDDD--FENKTVTISYSFQNAVTETHNSHIEKLNMLNEKDVKLPTKS   286
MIT_Spar_c127_4044   244   SQTDDDD-SYENKTVTISYCFQNMVNEDRGDHMEKLYPSTKEKIKSPTKS   292
WashU_Sbay_Contig660.60   239   SHTDDDD--FENKTVTISYSFQNAVTETHNSHIEKLNMLNEKDVKLPTKS   286
WashU_Skud_Contig1929.6   250   SHTDDDDDGYENKTVTISYCFQNTVNENQSDHTEKLNLLSGNKVKPHTKP   299
Symbols






*:***** :*********.*:* *.* :..* *** . :. * *:.



SGD_Scer_AFR1/YDR085C   293   GLFDRKKKTILGTEKYRCIKSQSKLKLGSVLKKLWRTSGNSNTKHGKKDT   342
MIT_Sbay_c902_21116   287   GPLGRKKRSNSGHCKNECKKSSSRLNLGSVLKKLWSSSGKSNTKPNKKHP   336
MIT_Spar_c127_4044   293   GLLDGRKKTILGTERNSCKKSPSRLKLGSVLKKFWYTSRNSNTRHSKNDM   342
WashU_Sbay_Contig660.60   287   GPLGRKKRSNSGHCKNECKKSSSRLNLGSVLKKLWSSSGKSNTKPNKKHP   336
WashU_Skud_Contig1929.6   300   KVFDGKRKITSGNDRKGGKKPSLRSNLGFVLKRLWSSSGNSDRKHSKKYM   349
Symbols






:. ::: * : *. : :** ***::* :* :*: : .*:



SGD_Scer_AFR1/YDR085C   343   KRR-RIPIDDMVTHSDGNSEAENDIELMDANLDGIEFDDDETLMDTDSIF   391
MIT_Sbay_c902_21116   337   KKK-LDPSNDIAEHFDELPDIENDIDLMDATLNSIEIDDDETLMDANSIF   385
MIT_Spar_c127_4044   343   KRK-KIPVDDIITHSDENFEIESDIELMDANLDGIEIDDDKTLMDTDSIF   391
WashU_Sbay_Contig660.60   337   KKK-LDPSNDIAEHFDELPDIENDIDLMDATLNSIEIDDDETLMDANSIF   385
WashU_Skud_Contig1929.6   350   KKEQTTPVDEISNDFDEISDLEKDVDLKDANLNGIEIDDDETLMDANSIF   399
Symbols






*:. * ::: . * : *.*::* **.*:.**:***:****::***



SGD_Scer_AFR1/YDR085C   392   DDLLSKENDKYDLRRRQLEIRQKLHETSHNDDGKVSFRDTEKHNVNEGLI   441
MIT_Sbay_c902_21116   386   DDLLSKENNKNDSRQKQLEIRQKLHETAPNGHTDTSRRNMKENGINDALF   435
MIT_Spar_c127_4044   392   DDLLSKEDNKYDSRRKQLEIRQKLHETLPNDDGKTSCRDTEKDNIKDVLI   441
WashU_Sbay_Contig660.60   386   DDLLSKENNKNDSRQKQLEIRQKLHETAPNGHTDTSRRNMKENGINDALF   435
WashU_Skud_Contig1929.6   400   DDLLSREDNKHDCRRKQLEIRQKLHETIPNDDGETSCRNIEEASVNDVLI   449
Symbols






*****:*::* * *::*********** *.. ..* *: :: .::: *:



SGD_Scer_AFR1/YDR085C   442   DKTIIEEFSKLGEYIIDTRNQPPPRSSKRPSLDDNESARYFYNISTDLRQ   491
MIT_Sbay_c902_21116   436   DKTIIEDFSKLGEYIIDTRNQPPPRSTKRPSLDNNESARHFYSLPTDSRQ   485
MIT_Spar_c127_4044   442   DETIIEDFSKLGDYIIDTRNQPPPRSSKRPSLDDNESARHFYNISTDLRE   491
WashU_Sbay_Contig660.60   436   DKTIIEDFSKLGEYIIDTRNQPPPRSTKRPSLDNNESARHFYSLPTDSRQ   485
WashU_Skud_Contig1929.6   450   DETLIEDFSKLGEYIIDTRNRPPPRSLKRPSLDNNECARSFYGIPTDLRQ   499
Symbols






*:*:**:*****:*******:***** ******:**.** **.:.** *:



SGD_Scer_AFR1/YDR085C   492   SLSGPISLPMHVGNDMVNRLRNDWEYIRFEDRRNSLPDSSFDKVETPPKP   541
MIT_Sbay_c902_21116   486   HLFGTVSLPMNVGNDIVDRLRNDWEYIRFEDFENSSPKCSSSNVEAVSKP   535
MIT_Spar_c127_4044   492   SLSNPISLPIHVGSDMVNRLRNDWEYIKFEDRRNSLSDSSFSNAGTASKP   541
WashU_Sbay_Contig660.60   486   HLFGTVSLPMNVGNDIVDRLRNDWEYIRFEDFENSSPKCSSSNVEAVSKP   535
WashU_Skud_Contig1929.6   500   SLSGPISLPMHVGSDIVDRLRNDWEYIRFENYGSSSTNSSLSKVGAALKP   549
Symbols






* ..:***::**.*:*:*********:**: .* ...* .:. : **



SGD_Scer_AFR1/YDR085C   542   IK-KDVRFAKEVCLASTWSSNAYERANPEFIMNRHRLLWMMKVHPSMNSA   590
MIT_Sbay_c902_21116   536   TKKKGVRFAEEVCLASTWSSNVYERANPEFIMNRHRLLWMMKVNPSMNKA   585
MIT_Spar_c127_4044   542   IK-KDVRFAKEVYLASTWSSNAYERANPEFIMNRHKLLWMMKVHPSMNSA   590
WashU_Sbay_Contig660.60   536   TKKKGVRFAEEVCLASTWSSNVYERANPEFIMNRHRLLWMMKVNPSMNKA   585
WashU_Skud_Contig1929.6   550   TN-KGVRFAQEVCLASTWSSNAYERANPEFIMNRHRLLWMMKVNPSMNSA   598
Symbols






: *.****:** ********.*************:*******:****.*



SGD_Scer_AFR1/YDR085C   591   MNEIKLELNSYKKNEMVVHENSKCFTHYLI   620
MIT_Sbay_c902_21116   586   MNEVKLELNYFKRNEMVVHKNSKCFTHYLI   615
MIT_Spar_c127_4044   591   MEEVKLELNSYKKNEMVVHENSKCFTHYLI   620
WashU_Sbay_Contig660.60   586   MNEVKLELNYFKRNEMVVHKNSKCFTHYLI   615
WashU_Skud_Contig1929.6   599   MNEVKLELNSFKENEMVVHEHSKCFTHYLL   628
Symbols






*:*:***** :*.******::********:



Symbols:
* = identical
: = strong similarity
. = weak similarity


- Download all sequences in alignment, in FASTA format.
GCG format sequences are displayed below.




Protein Sequence for SGD_Scer_AFR1/YDR085C:

SGD_Scer_AFR1/YDR085C  Length: 621  Sat Dec 10 02:54:23 2011  Type: P  Check: 9749  ..

       1  MEGSYLSAQE NQPIPERLIP RSNSTSNLFA LSSTFSKLNV RNDADYNYSN

      51  PNKKRHIYSG EIDCRSVTAA RKFPVRSCSM TAAQQRKRTA LFTVRERNSY

     101  HEGFNNDQDY VSQYQKPQYT FGVYKELTPY QLQRSKMKRS FQFPNGEIYK

     151  PKLDGKCTHS LKKPELNSRD SSLFKFSEKK GRNLSKDFVG PHNGTSVIHI

     201  PPNDTGYGVN SLELNTSVPS TIKSSVSSTS PISAVNTLTS LPESQTDDDD

     251  GYENKTVTIS YCFENTVNEK HGSHIEKLDL STKEKTKPTT NSGLFDRKKK

     301  TILGTEKYRC IKSQSKLKLG SVLKKLWRTS GNSNTKHGKK DTKRRRIPID

     351  DMVTHSDGNS EAENDIELMD ANLDGIEFDD DETLMDTDSI FDDLLSKEND

     401  KYDLRRRQLE IRQKLHETSH NDDGKVSFRD TEKHNVNEGL IDKTIIEEFS

     451  KLGEYIIDTR NQPPPRSSKR PSLDDNESAR YFYNISTDLR QSLSGPISLP

     501  MHVGNDMVNR LRNDWEYIRF EDRRNSLPDS SFDKVETPPK PIKKDVRFAK

     551  EVCLASTWSS NAYERANPEF IMNRHRLLWM MKVHPSMNSA MNEIKLELNS

     601  YKKNEMVVHE NSKCFTHYLI *

Protein Sequence for MIT_Sbay_c902_21116:

MIT_Sbay_c902_21116  Length: 616  Sat Dec 10 02:54:23 2011  Type: P  Check: 5463  ..

       1  MERQYLSGQE DQPISERLVP RSNSTSNLFS LSSTFSKLNV RNDAEYNSFG

      51  PNKKRHVHRY ENGQDPMTRT NSFPARSSSM TAAQRNNKTA FFTVKQRNSY

     101  HEGLNEDYYR QGQCQNPPNT ARMYRKLTPY QIQRSKMKTS FRFPNGEVFQ

     151  PKPEGKNSTS SKKISLSSKN PFSFSFGQKG GSAPLEKFPA QVPSAPNTET

     201  FQDTNSLNSS SSVPSTTKSS IASSSPISTV NTPTSCTESH TDDDDFENKT

     251  VTISYSFQNA VTETHNSHIE KLNMLNEKDV KLPTKSGPLG RKKRSNSGHC

     301  KNECKKSSSR LNLGSVLKKL WSSSGKSNTK PNKKHPKKKL DPSNDIAEHF

     351  DELPDIENDI DLMDATLNSI EIDDDETLMD ANSIFDDLLS KENNKNDSRQ

     401  KQLEIRQKLH ETAPNGHTDT SRRNMKENGI NDALFDKTII EDFSKLGEYI

     451  IDTRNQPPPR STKRPSLDNN ESARHFYSLP TDSRQHLFGT VSLPMNVGND

     501  IVDRLRNDWE YIRFEDFENS SPKCSSSNVE AVSKPTKKKG VRFAEEVCLA

     551  STWSSNVYER ANPEFIMNRH RLLWMMKVNP SMNKAMNEVK LELNYFKRNE

     601  MVVHKNSKCF THYLI*

Protein Sequence for MIT_Spar_c127_4044:

MIT_Spar_c127_4044  Length: 621  Sat Dec 10 02:54:23 2011  Type: P  Check: 9330  ..

       1  MEGSYLSSQE NQPIPDRLIP RSNSTSNLFA LSSTFSKLNV RNDAEYSYLG

      51  PNKKRHIYNG ETSRGSVAVD RNFPVRSSSM TAAQQRKRTA LFTARERNSY

     101  HEGFNNDYNY ANHYQNPRNT LAVYKELTPY QLQRSRMKTS FQFPNGEIYK

     151  PKPDGKCSHS LRKASLNPRN SFLFKFSEKK DSSSSKDSVN PYNAASILPT

     201  SHTDINDGLN SLELNTSVPS TIKGSLSSTS PISAVNTLRS LTESQTDDDD

     251  SYENKTVTIS YCFQNMVNED RGDHMEKLYP STKEKIKSPT KSGLLDGRKK

     301  TILGTERNSC KKSPSRLKLG SVLKKFWYTS RNSNTRHSKN DMKRKKIPVD

     351  DIITHSDENF EIESDIELMD ANLDGIEIDD DKTLMDTDSI FDDLLSKEDN

     401  KYDSRRKQLE IRQKLHETLP NDDGKTSCRD TEKDNIKDVL IDETIIEDFS

     451  KLGDYIIDTR NQPPPRSSKR PSLDDNESAR HFYNISTDLR ESLSNPISLP

     501  IHVGSDMVNR LRNDWEYIKF EDRRNSLSDS SFSNAGTASK PIKKDVRFAK

     551  EVYLASTWSS NAYERANPEF IMNRHKLLWM MKVHPSMNSA MEEVKLELNS

     601  YKKNEMVVHE NSKCFTHYLI *

Protein Sequence for WashU_Sbay_Contig660.60:

WashU_Sbay_Contig660.60  Length: 616  Sat Dec 10 02:54:23 2011  Type: P  Check: 5463  ..

       1  MERQYLSGQE DQPISERLVP RSNSTSNLFS LSSTFSKLNV RNDAEYNSFG

      51  PNKKRHVHRY ENGQDPMTRT NSFPARSSSM TAAQRNNKTA FFTVKQRNSY

     101  HEGLNEDYYR QGQCQNPPNT ARMYRKLTPY QIQRSKMKTS FRFPNGEVFQ

     151  PKPEGKNSTS SKKISLSSKN PFSFSFGQKG GSAPLEKFPA QVPSAPNTET

     201  FQDTNSLNSS SSVPSTTKSS IASSSPISTV NTPTSCTESH TDDDDFENKT

     251  VTISYSFQNA VTETHNSHIE KLNMLNEKDV KLPTKSGPLG RKKRSNSGHC

     301  KNECKKSSSR LNLGSVLKKL WSSSGKSNTK PNKKHPKKKL DPSNDIAEHF

     351  DELPDIENDI DLMDATLNSI EIDDDETLMD ANSIFDDLLS KENNKNDSRQ

     401  KQLEIRQKLH ETAPNGHTDT SRRNMKENGI NDALFDKTII EDFSKLGEYI

     451  IDTRNQPPPR STKRPSLDNN ESARHFYSLP TDSRQHLFGT VSLPMNVGND

     501  IVDRLRNDWE YIRFEDFENS SPKCSSSNVE AVSKPTKKKG VRFAEEVCLA

     551  STWSSNVYER ANPEFIMNRH RLLWMMKVNP SMNKAMNEVK LELNYFKRNE

     601  MVVHKNSKCF THYLI*

Protein Sequence for WashU_Skud_Contig1929.6:

WashU_Skud_Contig1929.6  Length: 629  Sat Dec 10 02:54:23 2011  Type: P  Check: 7042  ..

       1  MERSYLSAQE DQSIPERLVP RSNSTSNLFA LSDTFSKLNV RNDGDYNSLG

      51  PNKKRHVYGD RMERMGYGSM VGTNGFPVRS SSMTAAQHER KTTLFTVKRN

     101  SYQEGLNKGH NYESQYQSAQ NTLRVYGKLT PYQLQRSKMR TSFRFPNGEI

     151  YKPRLDGKGS PTSKKGGLNS KSSFLFKFRE REDSTLPEDS ATSYNAAQIP

     201  SLSNMDKNQD TNSLKSGSSV SSTAKSSIAS SSPISSPIST VNTPTSFTES

     251  HTDDDDDGYE NKTVTISYCF QNTVNENQSD HTEKLNLLSG NKVKPHTKPK

     301  VFDGKRKITS GNDRKGGKKP SLRSNLGFVL KRLWSSSGNS DRKHSKKYMK

     351  KEQTTPVDEI SNDFDEISDL EKDVDLKDAN LNGIEIDDDE TLMDANSIFD

     401  DLLSREDNKH DCRRKQLEIR QKLHETIPND DGETSCRNIE EASVNDVLID

     451  ETLIEDFSKL GEYIIDTRNR PPPRSLKRPS LDNNECARSF YGIPTDLRQS

     501  LSGPISLPMH VGSDIVDRLR NDWEYIRFEN YGSSSTNSSL SKVGAALKPT

     551  NKGVRFAQEV CLASTWSSNA YERANPEFIM NRHRLLWMMK VNPSMNSAMN

     601  EVKLELNSFK ENEMVVHEHS KCFTHYLL*