 |
Advanced Search,
Full-text Search (Textpresso),
Search SGD web pages, Global Gene Hunter, Search Literature, and more.
|
 |
Getting Started, Sitemap, FAQ, and more.
|
 |
BLAST, Gene/Seq Resources, Maps,
and more.
|
 |
PDB Homologs, Protein Domains/Motifs, Homologs, and more.
|
 |
Protein Info,
Function Junction,
Pathways,
Expression Connection, and more.
|
 |
GO Tutorial, What is GO?, GO Slim Mapper,
GO Term Finder, and more.
|
 |
Search
SGD colleagues, Find yeast labs,
Conferences & Seminars,
Community wiki, and more.
|
 |
Gene Registry,
Colleague update, Contact SGD, and more.
|
 |
FTP,
Batch Download,
Lab strains,
Auxotrophic markers,
Gene Names,
Sequencing Tables,
SGD Lite,
and more.
|
 |
Virtual Library, and more.
|
 |
Genome Snapshot,
Usage statistics, Citing SGD, Publications, Staff, and more.
|
|
SGD Search Options
|
 |
|
| |
| All the search options listed below search for
information within the Saccharomyces Genome Database (*with
the exception of Global Gene Hunter, Expression Connection,
and Function Junction, which search other databases as
well) |
|
 SGD Basic Searches
|
| Note: All searches are case insensitive; wildcard
character (*) ok; colleague searches only last name of colleague; view
examples |
| |
| SGD Quick Search: | |
| Use a keyword to simultaneously
search 10 major categories of information in SGD (gene name, gene product, GO
terms, GOIDs, colleagues, authors, biochemical pathways, PubMed IDs,
external database identifiers
and gene product descriptions).
|
|
| |
| SGD Text
Search: |
|
| Use a keyword to simultaneously search 12 major categories of information in SGD (gene name, gene product, GO
terms, colleagues, authors, biochemical pathways, gene summary
paragraphs, abstracts, name descriptions, gene product descriptions,
phenotypes, and locus history notes).
|
|
| |
| SGD Advanced Searches |
|
Advanced
Search
Find a chromosomal feature (e.g., gene, ORF,
centromere) based on selected criteria (e.g., calculated pI,
MW, chromosome number, GO-Slim terms, etc.)
|
| |
| Search SGD Web Pages |
|
|
| Search Yeast Literature |
Search Literature in SGD
View SGD's annotated literature guide
Full-text literature Search (Textpresso)
Link to the SGD Literature Search powered by Textpresso, a text-mining tool useful for the extraction of user
specified information from full-text journal articles
List of genome-wide analysis papers
Link to a list of genome-wide analysis papers(eg. microarray analysis publications) stored in SGD
Table of Gene Summary Paragraphs
Link to existing Gene Summary Paragraphs
Yeast Genome Directory
A collection of papers describing the sequencing of each chromosome of the S. cerevisiae genome
YGMB Meeting Abstracts
Search Yeast Genetics & Molecular Biology Meeting abstracts from:
2006 |2005 | 2004 | 2003 | 2002 | 2001 | 2000 | 1998 | 1996
|
| |
| |
|
Specialized Gene
and Sequence Searches |
Chromosome
History Search
Displays the complete sequence and annotation
history of each chromosome since the initial release of the
systematic reference sequence in 1996
Gene/Sequence Resources
Display and analyze a gene or sequence in many ways, such as protein translation and restriction mapping
Global
Gene Hunter * Searches other
databases in addition to SGD
Find everything about a yeast gene from multiple databases
Search
clones
Find DNA clones that match a clone name or
that contain a specific ORF
|
| Search
Gene Function Information |
Search
Yeast Biochemical Pathways
Search for and display biochemical pathways
that occur in S. cerevisiae
Function
Junction *
Searches other
databases/datasets in addition to SGD
Retrieve functional analysis data from multiple web sites
Expression
Connection *
Searches other
databases/datasets in addition to SGD
Retrieve gene expression data from multiple microarray experiments
Search SAGE Data
Search for and display SAGE tags in the yeast genome
Advanced Search for SAGE Data
Use query syntax to perform complex operations on SAGE data
|
| Search Protein Information |
Search Protein Info
Provides basic protein information calculated from the predicted sequence and contains links to a variety of secondary structure and tertiary structure resources.
PDB Homolog Query
This query page allows you to search for structural information on Saccharomyces cerevisiae proteins
Yeast Protein Motif Query
This query page allows you to retrieve motif information for Saccharomyces cerevisiae proteins |
| Search Colleague Information |
Search SGD Colleagues
Search SGD for yeast colleagues
Yeast Laboratories
Links to PIs of yeast laboratories |
|
